Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816723.1_cds_XP_016498934.1_12907
CDS Infomation

[gene=LOC107817597] [db_xref=GeneID:107817597] [protein=WD repeat-containing protein 44-like] [protein_id=XP_016498934.1] [location=complement(join(6461..7170,7259..7352,7441..7520,7611..7662,7932..8089,8185..8312,8725..10283))] [gbkey=CDS]
Sequence

ATGGACCGCAGGACCCTAACGATGAACTGGGATGGTCTTGGAGAAGATGATGATGATGAC
AACTTCTTTGAGTCCCGTGACCGGCTTTCAACAGCCATTCCCTTTGACTTGGCATCCTCA
GGATCAGACGACGATGATGAATTCGAGGATAGCCGCCTCTCCTTTGTCTCGACCCTTTCC
TCAGCCTCCATAAAGAAATTCCAAGGGATTGAGATTGAGGCAGTTTCTGATTCTTTCACC
AGCATGGAGGACTATGGCATGTGGATGGCTGAACCTGGTGATATCAAGGAACGTCGAAGG
CGTCTCCTTCAAGGCATGGGGTTATCAAGCAATAAGGACCTCCTCAAGCTCAAAAGCGCC
AAGATTGTACGAGCCATTTCAAGAAAAGTTGAGACCAGCCAAGATTCCAAACCACCAAAG
GCTGAATATTCTCCTGCAAAAGAATTAAATCCAGAACAACAGCCATCAGCTTCACAGCCA
ATTGTGCTGGTCAGGTCGAGATCAGACGGAGACATACAATATTTTTCTGTGAATACCAAG
AAAAGGAAAGAGGAGCTAATTGGTGAAATCTCTAAACAGCGGCTCACTAGGACATTTTCA
GGTGTTTTGGCACCGAGCTTAGGAATATGCAAATTAGCTGGTTCGGTTAGAATGTCACAC
AGAAAGAACACAAGTGGATCGTCAATGCAAAATGGCAGTGATATGTCATCCACATTGTCG
AATGGGAATCCTGACGTGGGCTTTGCTTCATTCTTCTTGATAAAGAATTTGGACACTGGA
AAGGAGTTCATTGTCAAAGAGTCTAACGAACAGGGAATGTGGAATAAGCTCAGTGATCTT
CAGACAGGAAAGCAGCTTACCATGGATGAATTTGAGAAATATGTGGGATATTCTCCTGTT
GTAAAGGAACTGATGCGCCGGGTAAATGGTTCAAGAAATCATGATGATGAGAGGAAATTA
AACGCAAATTCATATTTGAGTAAAAGCTTCAGAAATAGCAAGAGAAGGGGAGTTGCTCTT
TTGAAGAACATAAAAGGAGTAGCACATAGCATGAGCGGAAAAATTATTGATAAAGAACGT
GAGCAAACGGCGCCTGAGGAACATCAGAAACCAAATAAGGACTCCTCCAAATGGATTAAA
GTCCGCCAGCATGGAAAGTCCTACAAGGAACTCACAGCTATGCACTTGTGCCAGGAAATC
CGTGCTCACGAGGGCTCAATTTGGACCATAAGGTTCAGCTCAGACGCACGCTATCTAGCA
ACTGCAGGGGAAGATACGTTAATTCATATATGGGAAGTGCAAGAATGTGAAGTTATGAAT
GACGTACACTCTGTTGTTGGTGCTGCAAGTACCTCACCTACTCATCCAATGGCTTGCTCT
CTCAGTACCTCCCCTGTTCATCCAATTGCAAGGACCAATTCCGACCGGCCTCCTCTGCCA
GAGATGGGACATATGGCATCAGAAAGAAGGAAGAGGGGGAAGGTCTCCCATAAGAAAAAG
GGAAACTCANCAAATTCCAATTTATGTGAAAGTTTTTCCTTTTTAGTTAGTCCCATTTAC
ATACATACTAACATGCACTATCAAACTTGGATGCAGCTACTTCTTTCATCTTCGATAGAC
AAGACTGTTCGGCTATGGGATATTGAAACTCAAAGTTGCTTAAAAATGTTCGCGCATAAT
GACTATGTTACTTGCATACAGGTCAATCCAATGGATGATGACTACTTCATCAGCGGTTCT
CTAGACGCAAAGGTTCGGATTTGGAATATACCTGATCGGAAAGTTGTAGATTGGACTGAT
CTTCATGAAATGGTCACTGCTACTTGCTTCACCCCAGATGGCCAGGGTGCTTTAATAGGC
TCACATAAAGGCAGCTGTCGTGTGTACACTACCTCCGAATGCAAACTGGAACAAAAAGAC
AACATCGACATTCAGCCTAAGAAAAATTCTCAACTCAAGAAGGTCACTGGTTTACAGTTT
GCCCCATGGAACCCAGCAGAAGTGCTTATAACTTCAGCTGATTCTCGTATCAGAATTTTT
GACGGGTCAGAGATGATCTATAAGTTTAGAGGTTTCCGAAATACAAGCAGCCAAATTGCA
GCTTCGTTCAGTTCAGATGGGAAGTATGTCATAAGTGCAAGTGAAGACTCTCATGTCTAC
ATCTGGAAGAGAGAAGAACCTAAGACCCCCACCGGTAAACGTAGAACTTCAGTCTCTGTT
CAAGCTCACGAGCGCTTTCAATGCAAAGATGTTTCAGTTGCCATCCCATGGCCAGGTAGT
GTAAAGAATGAACCACCACTTGTAGAGATGCACTCAAAAAGGCATTCAAAACGCTTCCTC
CCGCCCCCATATCCCACTGTTGGCTCTCCTACAAAAGAAAACCCTGATGTGGCAAATAGT
AAAAGACATTTGCCACCTCTACCCATAAAAGTTAATGCATCGGAGAGAGTCCAAAGTAGC
CAGGAAGAGGAAGACTTAGCTCAACTTTCTCGGACAGATTCTGGTATTGGTCCCAGTGAA
TCATTTGTATCAGGTTCTTCATCAACTAGGTTTGGTGATTCACCTTCTATATCTGCATCC
AGCAGCTCACGCTCACACTCTTGGTCCTCCTCCTGGTCTCAAGATGGTAGTAACAGCAAT
GGCAGCAACGTTGTCCAAGCAACAGCATGGGGCATGGTAATTGTGACAGCAAGTTTGGGA
GGTGAGATCAGGGTGTATCAAAATTTTGGGCTACCTCTGAAAGCTGGTCGTCAGACCAAT
CTCTTTAGAGATCTGACATAA

Peptide Sequence

PEP ID

XP_016498934.1
PEP Infomation

PREDICTED: WD repeat-containing protein 44-like [Nicotiana tabacum]
Sequence

MDRRTLTMNWDGLGEDDDDDNFFESRDRLSTAIPFDLASSGSDDDDEFEDSRLSFVSTLS
SASIKKFQGIEIEAVSDSFTSMEDYGMWMAEPGDIKERRRRLLQGMGLSSNKDLLKLKSA
KIVRAISRKVETSQDSKPPKAEYSPAKELNPEQQPSASQPIVLVRSRSDGDIQYFSVNTK
KRKEELIGEISKQRLTRTFSGVLAPSLGICKLAGSVRMSHRKNTSGSSMQNGSDMSSTLS
NGNPDVGFASFFLIKNLDTGKEFIVKESNEQGMWNKLSDLQTGKQLTMDEFEKYVGYSPV
VKELMRRVNGSRNHDDERKLNANSYLSKSFRNSKRRGVALLKNIKGVAHSMSGKIIDKER
EQTAPEEHQKPNKDSSKWIKVRQHGKSYKELTAMHLCQEIRAHEGSIWTIRFSSDARYLA
TAGEDTLIHIWEVQECEVMNDVHSVVGAASTSPTHPMACSLSTSPVHPIARTNSDRPPLP
EMGHMASERRKRGKVSHKKKGNSXNSNLCESFSFLVSPIYIHTNMHYQTWMQLLLSSSID
KTVRLWDIETQSCLKMFAHNDYVTCIQVNPMDDDYFISGSLDAKVRIWNIPDRKVVDWTD
LHEMVTATCFTPDGQGALIGSHKGSCRVYTTSECKLEQKDNIDIQPKKNSQLKKVTGLQF
APWNPAEVLITSADSRIRIFDGSEMIYKFRGFRNTSSQIAASFSSDGKYVISASEDSHVY
IWKREEPKTPTGKRRTSVSVQAHERFQCKDVSVAIPWPGSVKNEPPLVEMHSKRHSKRFL
PPPYPTVGSPTKENPDVANSKRHLPPLPIKVNASERVQSSQEEEDLAQLSRTDSGIGPSE
SFVSGSSSTRFGDSPSISASSSSRSHSWSSSWSQDGSNSNGSNVVQATAWGMVIVTASLG
GEIRVYQNFGLPLKAGRQTNLFRDLT

Transcript Sequence

Gene sequence data has not been registered.